claude-scientific-skills

Skills (177)

• pptx

  Proprietary. LICENSE.txt has complete terms233 lines1415 words6 blocks

  "Use this skill any time a .pptx file is involved in any way — as input, output, or both. This includes: creating slide decks, pitch decks, or present...

  bash
• diffdock

  MIT license482 lines1926 words18 blocks

  Diffusion-based molecular docking. Predict protein-ligand binding poses from PDB/SMILES, confidence scores, virtual screening, for structure-based dru...

  bashcsvpython
• pyzotero

  MIT License112 lines492 words7 blocks

  Interact with Zotero reference management libraries using the pyzotero Python client. Retrieve, create, update, and delete items, collections, tags, a...

  bashpython
• pptx-posters

  MIT license415 lines2020 words15 blocks

  Create research posters using HTML/CSS that can be exported to PDF or PPTX. Use this skill ONLY when the user explicitly requests PowerPoint/PPTX post...

  bashcsshtmlpython
• scikit-survival

  GPL-3.0 license398 lines1645 words14 blocks

  Comprehensive toolkit for survival analysis and time-to-event modeling in Python using scikit-survival. Use this skill when working with censored surv...

  python
• simpy

  MIT license428 lines1455 words14 blocks

  Process-based discrete-event simulation framework in Python. Use this skill when building simulations of systems with processes, queues, resources, an...

  python
• uniprot-database

  Unknown194 lines827 words5 blocks

  Direct REST API access to UniProt. Protein searches, FASTA retrieval, ID mapping, Swiss-Prot/TrEMBL. For Python workflows with multiple databases, pre...

  python
• qiskit

  Apache-2.0 license274 lines1053 words8 blocks

  IBM quantum computing framework. Use when targeting IBM Quantum hardware, working with Qiskit Runtime for production workloads, or needing IBM optimiz...

  bashpython
• neuropixels-analysis

  MIT license349 lines1242 words18 blocks

  Neuropixels neural recording analysis. Load SpikeGLX/OpenEphys data, preprocess, motion correction, Kilosort4 spike sorting, quality metrics, Allen/IB...

  bashpython
• zinc-database

  Unknown403 lines1535 words19 blocks

  Access ZINC (230M+ purchasable compounds). Search by ZINC ID/SMILES, similarity searches, 3D-ready structures for docking, analog discovery, for virtu...

  bashpython
• literature-review

  MIT license638 lines3074 words17 blocks

  Conduct comprehensive, systematic literature reviews using multiple academic databases (PubMed, arXiv, bioRxiv, Semantic Scholar, etc.). This skill sh...

  bashmarkdownpython
• adaptyv

  Unknown113 lines440 words4 blocks

  Cloud laboratory platform for automated protein testing and validation. Use when designing proteins and needing experimental validation including bind...

  bashpython
• transformers

  Apache-2.0 license163 lines591 words9 blocks

  This skill should be used when working with pre-trained transformer models for natural language processing, computer vision, audio, or multimodal task...

  bashpython
• arxiv-database

  MIT363 lines1188 words18 blocks

  Search and retrieve preprints from arXiv via the Atom API. Use this skill when searching for papers in physics, mathematics, computer science, quantit...

  bashjsonpython
• biopython

  Unknown442 lines1687 words21 blocks

  Comprehensive molecular biology toolkit. Use for sequence manipulation, file parsing (FASTA/GenBank/PDB), phylogenetics, and programmatic NCBI/PubMed ...

  bashpython
• scientific-brainstorming

  MIT license190 lines1127 words

  Creative research ideation and exploration. Use for open-ended brainstorming sessions, exploring interdisciplinary connections, challenging assumption...

• statistical-analysis

  MIT license631 lines2555 words15 blocks

  Guided statistical analysis with test selection and reporting. Use when you need help choosing appropriate tests for your data, assumption checking, p...

  python
• clinical-decision-support

  MIT License511 lines3197 words8 blocks

  Generate professional clinical decision support (CDS) documents for pharmaceutical and clinical research settings, including patient cohort analyses (...

  bashlatex
• market-research-reports

  MIT license906 lines3846 words14 blocks

  Generate comprehensive market research reports (50+ pages) in the style of top consulting firms (McKinsey, BCG, Gartner). Features professional LaTeX ...

  bashlatex
• matplotlib

  https://github.com/matplotlib/matplotlib/tree/main/LICENSE360 lines1363 words20 blocks

  Low-level plotting library for full customization. Use when you need fine-grained control over every plot element, creating novel plot types, or integ...

  bashpython